Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs75874981 chr20:60345205 C/A 1.64E-11 169 23.27 18 2.2 KM Plot
UCEC rs7593863 chr2:12855750 C/T 3.99E-9 174 4.5 25.3 22.38 KM Plot
UCEC rs760112 chr10:88719569 A/G 1.27E-6 174 17.17 23.97 22.6 KM Plot
UCEC rs76125784 chr22:50288783 TTCA/T 1.7E-6 172 22.8 20.93 14.4 KM Plot
UCEC rs76193270 chr14:73682226 G/A 4.61E-7 174 22.57 27.05 10.33 KM Plot
UCEC rs76221206 chr4:3469909 G/A 9.25E-8 166 21.3 27.97 13.77 KM Plot
UCEC rs76285133 chr3:47984033 A/G 6.92E-7 172 22.63 22.25 11.53 KM Plot
UCEC rs76311591 chr12:94301169 C/T 5.85E-9 171 22.63 29.02 5.45 KM Plot
UCEC rs76311834 chr3:48148111 T/C 6.86E-6 173 22.6 22.25 11.53 KM Plot
UCEC rs76356675 chr14:73666904 A/G 4.61E-7 173 22.57 31.47 10.33 KM Plot
UCEC rs76426658 chr14:73648813 G/A 4.61E-7 173 22.57 31.47 10.33 KM Plot
UCEC rs76568631 chr7:20667427 A/G 0 171 22.67 20.13 4.33 KM Plot
UCEC rs7657711 chr4:57264426 T/C 0.000133 174 33.28 22.7 19.17 KM Plot
UCEC rs76658995 chr3:48166783 C/T 6.79E-6 172 22.6 21.6 11.53 KM Plot
UCEC rs76810343 chr14:105074167 T/C 0 167 22.57 22.78 1.67 KM Plot